Info

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Function
__pthread_kill_implementation
First occurrence
2024-01-14
Last occurrence
2024-01-14
State
NEW
Components
rstudio
Quality
-51

Statistics

Operating system Count
Fedora 39 37
Architecture Count
x86_64 37
Executable Count
/usr/libexec/rstudio/bin/rsession 37
Related packages Count
rstudio 37
 0:2023.12.1+402-1.fc39 35
 0:2023.12.0+369-1.fc39 2
clang-libs 12
 0:17.0.6-2.fc39 10
 0:17.0.6-1.fc39 2
llvm-libs 12
 0:17.0.6-3.fc39 10
 0:17.0.6-1.fc39 2
glibc-all-langpacks 10
 0:2.38-16.fc39 10

Packages names with count less than the total count of reports are most probably not the cause of the problem.

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Complete report #1410451
Frame # Function Binary Source or offset Line
1
__pthread_kill_implementation
/lib64/libc.so.6 0x90834
Build id: 7ea8d85df0e89b90c63ac7ed2b3578b2e7728756 		-
2
raise
/lib64/libc.so.6 0x3e8ee
Build id: 7ea8d85df0e89b90c63ac7ed2b3578b2e7728756 		-
3
abort
/lib64/libc.so.6 0x268ff
Build id: 7ea8d85df0e89b90c63ac7ed2b3578b2e7728756 		-
4
std::chrono::_V2::system_clock::now()
/lib64/libstdc++.so.6 0xd95b0
Build id: 135b17851e2f57f305c48a54822dfd08cdaf060e 		-
5
/home/paolomanildo/R/x86_64-redhat-linux-gnu-library/4.3/nrMCMCs/libs/nrMCMCs.so 0x6ba23
Build id: ec4f885ee3c1a822652ad4947f69db86aa33d683 		-
6
void split_and_merge<inf_Gauss2>(inf_Gauss2&, std::vector<std::vector<unsigned int, std::allocator<unsigned int> >, std::allocator<std::vector<unsigned int, std::allocator<unsigned int> > > >&, arma::Col<unsigned int>&, arma::Col<double>&, arma::Col<unsigned int>&, arma::Col<double>&, unsigned int const&, unsigned int const&, unsigned int const&, double const&, unsigned int const&, arma::Col<unsigned int>&, arma::Col<unsigned int> const&, bool const&, bool const&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::unordered_map<unsigned int, unsigned int, std::hash<unsigned int>, std::equal_to<unsigned int>, std::allocator<std::pair<unsigned int const, unsigned int> > >&, std::unordered_map<unsigned int, unsigned int, std::hash<unsigned int>, std::equal_to<unsigned int>, std::allocator<std::pair<unsigned int const, unsigned int> > >&, std::vector<unsigned int, std::allocator<unsigned int> >&)
/home/paolomanildo/R/x86_64-redhat-linux-gnu-library/4.3/nrMCMCs/libs/nrMCMCs.so 0x3b086
Build id: ec4f885ee3c1a822652ad4947f69db86aa33d683 		-
7
nrMCMC(Rcpp::RObject_Impl<Rcpp::PreserveStorage> const&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, unsigned int const&, double const&, double const&, Rcpp::RObject_Impl<Rcpp::PreserveStorage>, double const&, double const&, Rcpp::RObject_Impl<Rcpp::PreserveStorage>, Rcpp::RObject_Impl<Rcpp::PreserveStorage>, Rcpp::RObject_Impl<Rcpp::PreserveStorage>, Rcpp::Nullable<Rcpp::Vector<14, Rcpp::PreserveStorage> > const&, unsigned int const&, unsigned int const&, unsigned int, bool const&, bool const&, bool const&, double const&, double const&, bool const&, bool const&, bool const&, unsigned int const&, unsigned int const&, unsigned int const&)
/home/paolomanildo/R/x86_64-redhat-linux-gnu-library/4.3/nrMCMCs/libs/nrMCMCs.so 0x2f2a6
Build id: ec4f885ee3c1a822652ad4947f69db86aa33d683 		-
8
_nrMCMCs_nrMCMC
/home/paolomanildo/R/x86_64-redhat-linux-gnu-library/4.3/nrMCMCs/libs/nrMCMCs.so 0x32f23
Build id: ec4f885ee3c1a822652ad4947f69db86aa33d683 		-
9
R_doDotCall
/usr/lib64/R/lib/libR.so 0xffac4
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
10
do_dotcall
/usr/lib64/R/lib/libR.so 0x100540
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
11
bcEval.lto_priv.0
/usr/lib64/R/lib/libR.so 0x145b1b
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
12
Rf_eval
/usr/lib64/R/lib/libR.so 0x12e5e8
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
13
R_execClosure
/usr/lib64/R/lib/libR.so 0x12d223
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
14
Rf_applyClosure
/usr/lib64/R/lib/libR.so 0x12e330
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
15
Rf_eval
/usr/lib64/R/lib/libR.so 0x12e730
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
16
do_set
/usr/lib64/R/lib/libR.so 0x13472c
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
17
Rf_eval
/usr/lib64/R/lib/libR.so 0x12eac4
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
18
Rf_ReplIteration
/usr/lib64/R/lib/libR.so 0x18edd1
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
19
R_ReplConsole
/usr/lib64/R/lib/libR.so 0x18f191
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
20
run_Rmainloop
/usr/lib64/R/lib/libR.so 0x18f259
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
21
rstudio::r::session::run(rstudio::r::session::ROptions const&, rstudio::r::session::RCallbacks const&)
/usr/libexec/rstudio/bin/rsession 0x88247b
Build id: 76b610b6f57e4ab2dc63ae62223fbd00594a7bd8 		-
22
main
/usr/libexec/rstudio/bin/rsession 0x1ba98e
Build id: 76b610b6f57e4ab2dc63ae62223fbd00594a7bd8 		-
23
__libc_start_call_main
/lib64/libc.so.6 0x2814a
Build id: 7ea8d85df0e89b90c63ac7ed2b3578b2e7728756 		-
24
__libc_start_main@@GLIBC_2.34
/lib64/libc.so.6 0x2820b
Build id: 7ea8d85df0e89b90c63ac7ed2b3578b2e7728756 		-
25
_start
/usr/libexec/rstudio/bin/rsession 0x1f5e65
Build id: 76b610b6f57e4ab2dc63ae62223fbd00594a7bd8 		-
Complete report #1383008
Frame # Function Binary Source or offset Line
1
__pthread_kill_implementation
/lib64/libc.so.6 0x90834
Build id: 7ea8d85df0e89b90c63ac7ed2b3578b2e7728756 		-
2
raise
/lib64/libc.so.6 0x3e8ee
Build id: 7ea8d85df0e89b90c63ac7ed2b3578b2e7728756 		-
3
abort
/lib64/libc.so.6 0x2698f
Build id: 7ea8d85df0e89b90c63ac7ed2b3578b2e7728756 		-
4
std::chrono::_V2::system_clock::now()
/lib64/libstdc++.so.6 0xd95b0
Build id: 135b17851e2f57f305c48a54822dfd08cdaf060e 		-
5
LDA_non_rev_opt(arma::Mat<unsigned int>&, std::vector<std::vector<std::vector<std::vector<unsigned int, std::allocator<unsigned int> >, std::allocator<std::vector<unsigned int, std::allocator<unsigned int> > > >, std::allocator<std::vector<std::vector<unsigned int, std::allocator<unsigned int> >, std::allocator<std::vector<unsigned int, std::allocator<unsigned int> > > > > >, std::allocator<std::vector<std::vector<std::vector<unsigned int, std::allocator<unsigned int> >, std::allocator<std::vector<unsigned int, std::allocator<unsigned int> > > >, std::allocator<std::vector<std::vector<unsigned int, std::allocator<unsigned int> >, std::allocator<std::vector<unsigned int, std::allocator<unsigned int> > > > > > > >&, std::vector<std::unordered_map<unsigned int, unsigned int, std::hash<unsigned int>, std::equal_to<unsigned int>, std::allocator<std::pair<unsigned int const, unsigned int> > >, std::allocator<std::unordered_map<unsigned int, unsigned int, std::hash<unsigned int>, std::equal_to<unsigned int>, std::allocator<std::pair<unsigned int const, unsigned int> > > > >&, std::vector<std::unordered_map<unsigned int, unsigned int, std::hash<unsigned int>, std::equal_to<unsigned int>, std::allocator<std::pair<unsigned int const, unsigned int> > >, std::allocator<std::unordered_map<unsigned int, unsigned int, std::hash<unsigned int>, std::equal_to<unsigned int>, std::allocator<std::pair<unsigned int const, unsigned int> > > > >&, arma::Col<double>&, arma::Col<unsigned int>, arma::Col<double>&, arma::Mat<double>&, arma::Mat<double>&, arma::Mat<double>&, arma::Mat<double>&, std::vector<unsigned int, std::allocator<unsigned int> >&, arma::Cube<double>&, arma::Cube<double>&, double&, bool const&, arma::Col<unsigned int> const&, arma::Col<unsigned int> const&, unsigned int const&, unsigned int const&, double const&, double const&, double const&, unsigned int const&, unsigned int const&, unsigned int const&, double const&, bool const&, unsigned int const&, arma::Col<unsigned int>&, arma::Col<unsigned int> const&)
/tmp/RtmpPIql5K/sourceCpp-x86_64-redhat-linux-gnu-1.1.0/sourcecpp_bc8a28cf22/sourceCpp_2.so 0x61fa6
Build id: 57d734890b34b771438017ef6a791f3671210c20 		-
6
LDA_fit(arma::Col<unsigned int> const&, arma::Col<unsigned int> const&, arma::Col<unsigned int> const&, arma::Col<unsigned int> const&, unsigned int const&, unsigned int const&, unsigned int const&, unsigned int const&, unsigned int const&, bool const&, bool const&, bool const&, bool const&, double const&, double const&, double const&, double const&, unsigned int const&, bool const&, bool const&, bool const&, unsigned int const&)
/tmp/RtmpPIql5K/sourceCpp-x86_64-redhat-linux-gnu-1.1.0/sourcecpp_bc8a28cf22/sourceCpp_2.so 0x6cd17
Build id: 57d734890b34b771438017ef6a791f3671210c20 		-
7
sourceCpp_1_LDA_fit
/tmp/RtmpPIql5K/sourceCpp-x86_64-redhat-linux-gnu-1.1.0/sourcecpp_bc8a28cf22/sourceCpp_2.so 0x6e1d6
Build id: 57d734890b34b771438017ef6a791f3671210c20 		-
8
R_doDotCall
/usr/lib64/R/lib/libR.so 0xffbe4
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
9
do_dotcall
/usr/lib64/R/lib/libR.so 0x100540
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
10
Rf_eval
/usr/lib64/R/lib/libR.so 0x12ee0c
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
11
R_execClosure
/usr/lib64/R/lib/libR.so 0x12d223
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
12
Rf_applyClosure
/usr/lib64/R/lib/libR.so 0x12e330
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
13
bcEval.lto_priv.0
/usr/lib64/R/lib/libR.so 0x144c92
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
14
Rf_eval
/usr/lib64/R/lib/libR.so 0x12e5e8
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
15
R_execClosure
/usr/lib64/R/lib/libR.so 0x12d223
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
16
Rf_applyClosure
/usr/lib64/R/lib/libR.so 0x12e330
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
17
Rf_eval
/usr/lib64/R/lib/libR.so 0x12e730
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
18
do_set
/usr/lib64/R/lib/libR.so 0x13472c
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
19
Rf_eval
/usr/lib64/R/lib/libR.so 0x12eac4
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
20
Rf_ReplIteration
/usr/lib64/R/lib/libR.so 0x18edd1
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
21
R_ReplConsole
/usr/lib64/R/lib/libR.so 0x18f191
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
22
run_Rmainloop
/usr/lib64/R/lib/libR.so 0x18f259
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
23
rstudio::r::session::run(rstudio::r::session::ROptions const&, rstudio::r::session::RCallbacks const&)
/usr/libexec/rstudio/bin/rsession 0x88247b
Build id: 76b610b6f57e4ab2dc63ae62223fbd00594a7bd8 		-
24
main
/usr/libexec/rstudio/bin/rsession 0x1ba98e
Build id: 76b610b6f57e4ab2dc63ae62223fbd00594a7bd8 		-
25
__libc_start_call_main
/lib64/libc.so.6 0x2814a
Build id: 7ea8d85df0e89b90c63ac7ed2b3578b2e7728756 		-
26
__libc_start_main@@GLIBC_2.34
/lib64/libc.so.6 0x2820b
Build id: 7ea8d85df0e89b90c63ac7ed2b3578b2e7728756 		-
27
_start
/usr/libexec/rstudio/bin/rsession 0x1f5e65
Build id: 76b610b6f57e4ab2dc63ae62223fbd00594a7bd8 		-
Complete report #891371
Frame # Function Binary Source or offset Line
1
__pthread_kill_implementation
/lib64/libc.so.6 0x90834
Build id: 788cdd41a15985bf8e0a48d213a46e07d58822df 		-
2
raise
/lib64/libc.so.6 0x3e8ee
Build id: 788cdd41a15985bf8e0a48d213a46e07d58822df 		-
3
abort
/lib64/libc.so.6 0x268ff
Build id: 788cdd41a15985bf8e0a48d213a46e07d58822df 		-
4
std::chrono::_V2::system_clock::now()
/lib64/libstdc++.so.6 0xd9580
Build id: 43b5fe9c4fe0185772be4b57539be137c14a5c05 		-
5
proc_body_line(Rcpp::Matrix<16, Rcpp::PreserveStorage>, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, Rcpp::Vector<13, Rcpp::PreserveStorage>, int)
/home/mateusfalco/R/x86_64-redhat-linux-gnu-library/4.3/vcfR/libs/vcfR.so 0x34a57
Build id: 4a740e0f2ef51b4dbf9fe7a14cf10ef5d8928527 		-
6
read_body_gz(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, Rcpp::Vector<14, Rcpp::PreserveStorage>, long, long, Rcpp::Vector<13, Rcpp::PreserveStorage>, int, int)
/home/mateusfalco/R/x86_64-redhat-linux-gnu-library/4.3/vcfR/libs/vcfR.so 0x3575c
Build id: 4a740e0f2ef51b4dbf9fe7a14cf10ef5d8928527 		-
7
_vcfR_read_body_gz
/home/mateusfalco/R/x86_64-redhat-linux-gnu-library/4.3/vcfR/libs/vcfR.so 0x1c5b6
Build id: 4a740e0f2ef51b4dbf9fe7a14cf10ef5d8928527 		-
8
R_doDotCall
/usr/lib64/R/lib/libR.so 0xfff38
Build id: 14b60b9781d0b1a804432032a1608bf92ac1e7fb 		-
9
bcEval.lto_priv.0
/usr/lib64/R/lib/libR.so 0x147de7
Build id: 14b60b9781d0b1a804432032a1608bf92ac1e7fb 		-
10
Rf_eval
/usr/lib64/R/lib/libR.so 0x12e6d8
Build id: 14b60b9781d0b1a804432032a1608bf92ac1e7fb 		-
11
R_execClosure
/usr/lib64/R/lib/libR.so 0x12d313
Build id: 14b60b9781d0b1a804432032a1608bf92ac1e7fb 		-
12
Rf_applyClosure
/usr/lib64/R/lib/libR.so 0x12e420
Build id: 14b60b9781d0b1a804432032a1608bf92ac1e7fb 		-
13
bcEval.lto_priv.0
/usr/lib64/R/lib/libR.so 0x1400bb
Build id: 14b60b9781d0b1a804432032a1608bf92ac1e7fb 		-
14
Rf_eval
/usr/lib64/R/lib/libR.so 0x12e6d8
Build id: 14b60b9781d0b1a804432032a1608bf92ac1e7fb 		-
15
R_execClosure
/usr/lib64/R/lib/libR.so 0x12d313
Build id: 14b60b9781d0b1a804432032a1608bf92ac1e7fb 		-
16
Rf_applyClosure
/usr/lib64/R/lib/libR.so 0x12e420
Build id: 14b60b9781d0b1a804432032a1608bf92ac1e7fb 		-
17
Rf_eval
/usr/lib64/R/lib/libR.so 0x12e820
Build id: 14b60b9781d0b1a804432032a1608bf92ac1e7fb 		-
18
do_set
/usr/lib64/R/lib/libR.so 0x13480c
Build id: 14b60b9781d0b1a804432032a1608bf92ac1e7fb 		-
19
Rf_eval
/usr/lib64/R/lib/libR.so 0x12eb94
Build id: 14b60b9781d0b1a804432032a1608bf92ac1e7fb 		-
20
Rf_ReplIteration
/usr/lib64/R/lib/libR.so 0x18ef21
Build id: 14b60b9781d0b1a804432032a1608bf92ac1e7fb 		-
21
R_ReplConsole
/usr/lib64/R/lib/libR.so 0x18f2e1
Build id: 14b60b9781d0b1a804432032a1608bf92ac1e7fb 		-
22
run_Rmainloop
/usr/lib64/R/lib/libR.so 0x18f3a9
Build id: 14b60b9781d0b1a804432032a1608bf92ac1e7fb 		-
23
rstudio::r::session::run(rstudio::r::session::ROptions const&, rstudio::r::session::RCallbacks const&)
/usr/libexec/rstudio/bin/rsession 0x8820ab
Build id: 989ee3da4112ef8fa5c5358056a6242b492b293f 		-
24
main
/usr/libexec/rstudio/bin/rsession 0x1ba80e
Build id: 989ee3da4112ef8fa5c5358056a6242b492b293f 		-
25
__libc_start_call_main
/lib64/libc.so.6 0x2814a
Build id: 788cdd41a15985bf8e0a48d213a46e07d58822df 		-
26
__libc_start_main@@GLIBC_2.34
/lib64/libc.so.6 0x2820b
Build id: 788cdd41a15985bf8e0a48d213a46e07d58822df 		-
27
_start
/usr/libexec/rstudio/bin/rsession 0x1f57a5
Build id: 989ee3da4112ef8fa5c5358056a6242b492b293f 		-