Crash in PyUnicode_New

Similar reports
Problem #803893
Component
pymol
Last affected version
0:2.5.0-12.fc41
Executable
/usr/bin/python3.13
Error name
SIGSEGV 11
First occurrence
2024-12-26
Last occurrence
2025-11-23
Unique reports
2
Quality
-107

Statistics

Operating system Unique / Total count
Fedora 41 2 / 2
Operating system Count
Fedora 41 2
Architecture Count
x86_64 2
Related packages Count
flexiblas-netlib 2
 0:3.4.4-3.fc41 2
pymol 2
 0:2.5.0-12.fc41 2
tcl 2
 1:8.6.14-2.fc41 2
Show more… (4)
tk 2
 1:8.6.14-2.fc41 2
python3-numpy 2
 1:1.26.4-8.fc41 2
openblas-openmp 2
 0:0.3.26-5.fc41 2
python3 2
 0:3.13.1-2.fc41 2

Packages names with count less than the total count of reports are most probably not the cause of the problem.

History

Daily:

Weekly:

Monthly:

No reports in the last 20 days.

History

Daily:

Weekly:

Monthly:

No reports in the last 20 days.


Backtrace

Frame # Function Binary Source or offset Line
1
PyUnicode_New
/usr/lib64/libpython3.13.so.1.0 0x11d7e5
Build id: 0e4cba01a79b887381d37b04ae336391e967977a 		-
2
/usr/lib64/libpython3.13.so.1.0 0x12716a
Build id: 0e4cba01a79b887381d37b04ae336391e967977a 		-
3
CmdGetUnusedName(_object*, _object*) [clone .lto_priv.0]
/usr/lib64/python3.13/site-packages/pymol/_cmd.cpython-313-x86_64-linux-gnu.so 0x3b2786
Build id: 335af7e1b682cd1f6bb9ee89ffe6ca357a8e5091 		-
4
/usr/lib64/libpython3.13.so.1.0 0x17048a
Build id: 0e4cba01a79b887381d37b04ae336391e967977a 		-
5
_PyObject_MakeTpCall
/usr/lib64/libpython3.13.so.1.0 0x1387cb
Build id: 0e4cba01a79b887381d37b04ae336391e967977a 		-
6
_PyEval_EvalFrameDefault
/usr/lib64/libpython3.13.so.1.0 0x1518a2
Build id: 0e4cba01a79b887381d37b04ae336391e967977a 		-
7
/usr/lib64/libpython3.13.so.1.0 0x217a8e
Build id: 0e4cba01a79b887381d37b04ae336391e967977a 		-
8
PyObject_CallMethod
/usr/lib64/libpython3.13.so.1.0 0x2238fa
Build id: 0e4cba01a79b887381d37b04ae336391e967977a 		-
9
PyMOL_Idle
/usr/lib64/python3.13/site-packages/pymol/_cmd.cpython-313-x86_64-linux-gnu.so 0x3d3b84
Build id: 335af7e1b682cd1f6bb9ee89ffe6ca357a8e5091 		-
10
Cmd_Idle(_object*, _object*) [clone .lto_priv.0]
/usr/lib64/python3.13/site-packages/pymol/_cmd.cpython-313-x86_64-linux-gnu.so 0x3be28d
Build id: 335af7e1b682cd1f6bb9ee89ffe6ca357a8e5091 		-
11
/usr/lib64/libpython3.13.so.1.0 0x17048a
Build id: 0e4cba01a79b887381d37b04ae336391e967977a 		-
12
_PyObject_MakeTpCall
/usr/lib64/libpython3.13.so.1.0 0x1387cb
Build id: 0e4cba01a79b887381d37b04ae336391e967977a 		-
13
_PyEval_EvalFrameDefault
/usr/lib64/libpython3.13.so.1.0 0x14e701
Build id: 0e4cba01a79b887381d37b04ae336391e967977a 		-
14
/usr/lib64/libpython3.13.so.1.0 0x1a78d2
Build id: 0e4cba01a79b887381d37b04ae336391e967977a 		-
15
PyQtSlot::invoke(void**, _object*, void*, bool) const
/usr/lib64/python3.13/site-packages/PyQt5/QtCore.abi3.so 0x1713b7
Build id: 7fec2f98d5a4416ff891965b15dc1535ba9c0e92 		-
16
PyQtSlotProxy::qt_metacall(QMetaObject::Call, int, void**)
/usr/lib64/python3.13/site-packages/PyQt5/QtCore.abi3.so 0x175b0e
Build id: 7fec2f98d5a4416ff891965b15dc1535ba9c0e92 		-
17
/usr/lib64/libQt5Core.so.5 0x250c83
Build id: a5e409e62fde3134c47b4bc14e8d2b05c455265c 		-
18
QTimer::timeout(QTimer::QPrivateSignal)
/usr/lib64/libQt5Core.so.5 0x2553fd
Build id: a5e409e62fde3134c47b4bc14e8d2b05c455265c 		-
19
sipQTimer::timerEvent(QTimerEvent*)
/usr/lib64/python3.13/site-packages/PyQt5/QtCore.abi3.so 0x5d143
Build id: 7fec2f98d5a4416ff891965b15dc1535ba9c0e92 		-
20
QObject::event(QEvent*)
/usr/lib64/libQt5Core.so.5 0x248a7f
Build id: a5e409e62fde3134c47b4bc14e8d2b05c455265c 		-
21
sipQTimer::event(QEvent*)
/usr/lib64/python3.13/site-packages/PyQt5/QtCore.abi3.so 0x548c3
Build id: 7fec2f98d5a4416ff891965b15dc1535ba9c0e92 		-
22
QApplicationPrivate::notify_helper(QObject*, QEvent*)
/usr/lib64/libQt5Widgets.so.5 0x40c35
Build id: 5a37e82495a635f896791c2d1bf58392fff7d881 		-
23
sipQApplication::notify(QObject*, QEvent*)
/usr/lib64/python3.13/site-packages/PyQt5/QtWidgets.abi3.so 0x279306
Build id: 2c586cb22d1b650ac0ced3ae742f16e8a192089c 		-
24
QCoreApplication::notifyInternal2(QObject*, QEvent*)
/usr/lib64/libQt5Core.so.5 0x21bf78
Build id: a5e409e62fde3134c47b4bc14e8d2b05c455265c 		-
25
QTimerInfoList::activateTimers()
/usr/lib64/libQt5Core.so.5 0x26fc8e
Build id: a5e409e62fde3134c47b4bc14e8d2b05c455265c 		-
26
/usr/lib64/libQt5Core.so.5 0x270629
Build id: a5e409e62fde3134c47b4bc14e8d2b05c455265c 		-
27
g_main_context_dispatch_unlocked.lto_priv.0
/usr/lib64/libglib-2.0.so.0 0x4028c
Build id: 865a88f51bbf48869c7166397a8c69259849ea68 		-
28
g_main_context_iterate_unlocked.isra.0
/usr/lib64/libglib-2.0.so.0 0xa07b8
Build id: 865a88f51bbf48869c7166397a8c69259849ea68 		-
29
g_main_context_iteration
/usr/lib64/libglib-2.0.so.0 0x41783
Build id: 865a88f51bbf48869c7166397a8c69259849ea68 		-
30
QEventDispatcherGlib::processEvents(QFlags<QEventLoop::ProcessEventsFlag>)
/usr/lib64/libQt5Core.so.5 0x2709ed
Build id: a5e409e62fde3134c47b4bc14e8d2b05c455265c 		-
31
QEventLoop::exec(QFlags<QEventLoop::ProcessEventsFlag>)
/usr/lib64/libQt5Core.so.5 0x21a8db
Build id: a5e409e62fde3134c47b4bc14e8d2b05c455265c 		-
32
QCoreApplication::exec()
/usr/lib64/libQt5Core.so.5 0x222d46
Build id: a5e409e62fde3134c47b4bc14e8d2b05c455265c 		-
33
meth_QApplication_exec_.lto_priv.0
/usr/lib64/python3.13/site-packages/PyQt5/QtWidgets.abi3.so 0x2742c5
Build id: 2c586cb22d1b650ac0ced3ae742f16e8a192089c 		-
34
/usr/lib64/libpython3.13.so.1.0 0x17048a
Build id: 0e4cba01a79b887381d37b04ae336391e967977a 		-
35
_PyObject_MakeTpCall
/usr/lib64/libpython3.13.so.1.0 0x1387cb
Build id: 0e4cba01a79b887381d37b04ae336391e967977a 		-
36
_PyEval_EvalFrameDefault
/usr/lib64/libpython3.13.so.1.0 0x1518a2
Build id: 0e4cba01a79b887381d37b04ae336391e967977a 		-
37
PyEval_EvalCode
/usr/lib64/libpython3.13.so.1.0 0x21b52b
Build id: 0e4cba01a79b887381d37b04ae336391e967977a 		-
38
/usr/lib64/libpython3.13.so.1.0 0x23d690
Build id: 0e4cba01a79b887381d37b04ae336391e967977a 		-
39
/usr/lib64/libpython3.13.so.1.0 0x237f83
Build id: 0e4cba01a79b887381d37b04ae336391e967977a 		-
40
/usr/lib64/libpython3.13.so.1.0 0x259186
Build id: 0e4cba01a79b887381d37b04ae336391e967977a 		-
41
/usr/lib64/libpython3.13.so.1.0 0x25883f
Build id: 0e4cba01a79b887381d37b04ae336391e967977a 		-
42
/usr/lib64/libpython3.13.so.1.0 0x258661
Build id: 0e4cba01a79b887381d37b04ae336391e967977a 		-
43
Py_RunMain
/usr/lib64/libpython3.13.so.1.0 0x250c58
Build id: 0e4cba01a79b887381d37b04ae336391e967977a 		-
44
Py_BytesMain
/usr/lib64/libpython3.13.so.1.0 0x20a8dc
Build id: 0e4cba01a79b887381d37b04ae336391e967977a 		-
45
__libc_start_call_main
/usr/lib64/libc.so.6 0x3248
Build id: 8f0d04c433960a3a1d01ec9c4612545d44a9a405 		-
46
__libc_start_main@@GLIBC_2.34
/usr/lib64/libc.so.6 0x330b
Build id: 8f0d04c433960a3a1d01ec9c4612545d44a9a405 		-
47
_start
/usr/bin/python3.13 0x1095
Build id: 59deab8a1f44002a2b5d17e12d969cfe9afdc2d8 		-