Crash in __pthread_kill_implementation

Similar reports
Problem #498904
Component
dssp
Last affected version
0:3.0.0-24.fc41
Executable
/usr/bin/mkdssp
Error name
SIGABRT 6
First occurrence
2025-02-17
Last occurrence
2025-10-24
Unique reports
2
Quality
-18

Graphs

Statistics

Operating system Unique / Total count
Fedora 39 1 / 3
Fedora 40 1 / 10
Fedora 41 2 / 8
Operating system Count
Fedora 40 10
Fedora 41 8
Fedora 39 3
Architecture Count
x86_64 21
Related packages Count
dssp 21
 0:3.0.0-23.fc40 10
 0:3.0.0-24.fc41 8
 0:3.0.0-20.fc39 3
libstdc++ 18
 0:14.2.1-3.fc40 10
 0:14.3.1-3.fc41 8
boost-thread 18
 0:1.83.0-5.fc40 10
 0:1.83.0-8.fc41 8
Show more… (3)
boost-program-options 18
 0:1.83.0-5.fc40 10
 0:1.83.0-8.fc41 8
glibc 18
 0:2.39-38.fc40 10
 0:2.40-28.fc41 8
libgcc 18
 0:14.2.1-3.fc40 10
 0:14.3.1-3.fc41 8

Packages names with count less than the total count of reports are most probably not the cause of the problem.

History

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Backtrace

Frame # Function Binary Source or offset Line
1
__pthread_kill_implementation
/lib64/libc.so.6 0x908a4
Build id: 1cd2d1016ef987f11f5709c2aa0deb4520dcc851 		-
2
raise
/lib64/libc.so.6 0x3e8ee
Build id: 1cd2d1016ef987f11f5709c2aa0deb4520dcc851 		-
3
abort
/lib64/libc.so.6 0x268ff
Build id: 1cd2d1016ef987f11f5709c2aa0deb4520dcc851 		-
4
std::chrono::_V2::system_clock::now()
/lib64/libstdc++.so.6 0xd9600
Build id: 289d812be7557bb66c6cfdd6e429614136188789 		-
5
MProtein::ReadPDB(std::istream&, bool) [clone .constprop.0]
/usr/bin/mkdssp 0x3e1ab
Build id: c83912e85bac3d17bfc08da54cfc14fc82031b78 		-
6
main
/usr/bin/mkdssp 0x16a3d
Build id: c83912e85bac3d17bfc08da54cfc14fc82031b78 		-
7
__libc_start_call_main
/lib64/libc.so.6 0x2814a
Build id: 1cd2d1016ef987f11f5709c2aa0deb4520dcc851 		-
8
__libc_start_main@@GLIBC_2.34
/lib64/libc.so.6 0x2820b
Build id: 1cd2d1016ef987f11f5709c2aa0deb4520dcc851 		-
9
_start
/usr/bin/mkdssp 0x18845
Build id: c83912e85bac3d17bfc08da54cfc14fc82031b78 		-