Crash in __pthread_kill_implementation

Similar reports
Problem #498904
Component
dssp
Last affected version
0:3.0.0-24.fc41
Executable
/usr/bin/mkdssp
Error name
SIGABRT 6
First occurrence
2025-06-17
Last occurrence
2025-09-30
Unique reports
4
Quality
-18

Statistics

Operating system Unique / Total count
Fedora 42 4 / 38
Operating system Count
Fedora 42 38
Architecture Count
x86_64 38
Related packages Count
libstdc++ 38
 0:15.2.1-1.fc42 27
 0:15.1.1-2.fc42 11
libgcc 38
 0:15.2.1-1.fc42 27
 0:15.1.1-2.fc42 11
glibc 38
 0:2.41-11.fc42 27
 0:2.41-5.fc42 11
Show more… (3)
boost-program-options 38
 0:1.83.0-12.fc42 38
dssp 38
 0:3.0.0-24.fc41 38
boost-thread 38
 0:1.83.0-12.fc42 38

Packages names with count less than the total count of reports are most probably not the cause of the problem.

History

Daily:

Weekly:

Monthly:

No reports in the last 20 days.

No reports in the last 20 weeks.

History

Daily:

Weekly:

Monthly:

No reports in the last 20 days.

No reports in the last 20 weeks.


Backtrace

Frame # Function Binary Source or offset Line
1
__pthread_kill_implementation
/lib64/libc.so.6 0x7311c
Build id: 2b3c02fe7e4d3811767175b6f323692a10a4e116 		-
2
raise
/lib64/libc.so.6 0x19afe
Build id: 2b3c02fe7e4d3811767175b6f323692a10a4e116 		-
3
abort
/lib64/libc.so.6 0x16d0
Build id: 2b3c02fe7e4d3811767175b6f323692a10a4e116 		-
4
std::condition_variable::~condition_variable() [clone .cold]
/lib64/libstdc++.so.6 0xb086
Build id: a34f3756a2aefc3d2b7ae49335dfdd1b4555be43 		-
5
MProtein::ReadPDB(std::istream&, bool) [clone .constprop.0]
/usr/bin/mkdssp 0x402ca
Build id: 2142ab93dafb3faf7b3abbe31f9ace8c36d01495 		-
6
main
/usr/bin/mkdssp 0x11db0
Build id: 2142ab93dafb3faf7b3abbe31f9ace8c36d01495 		-
7
__libc_start_call_main
/lib64/libc.so.6 0x35f5
Build id: 2b3c02fe7e4d3811767175b6f323692a10a4e116 		-
8
__libc_start_main@@GLIBC_2.34
/lib64/libc.so.6 0x36a8
Build id: 2b3c02fe7e4d3811767175b6f323692a10a4e116 		-
9
_start
/usr/bin/mkdssp 0x13e35
Build id: 2142ab93dafb3faf7b3abbe31f9ace8c36d01495 		-