Crash in __pthread_kill_implementation

Similar reports
Problem #550175
Component
rstudio
Last affected version
0:2023.12.1+402-1.fc39
Executable
/usr/libexec/rstudio/bin/rsession
Error name
SIGABRT 6
First occurrence
2026-08-27
Last occurrence
2026-09-02
Unique reports
2
Quality
-46

Statistics

Operating system Unique / Total count
Fedora 39 2 / 4
Operating system Count
Fedora 39 4
Architecture Count
x86_64 4
Related packages Count
urw-base35-nimbus-sans-fonts 4
 0:20200910-18.fc39 4
rstudio 4
 0:2023.12.1+402-1.fc39 4

Packages names with count less than the total count of reports are most probably not the cause of the problem.

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Backtrace

Frame # Function Binary Source or offset Line
1
__pthread_kill_implementation
/lib64/libc.so.6 0x90834
Build id: 7ea8d85df0e89b90c63ac7ed2b3578b2e7728756 		-
2
raise
/lib64/libc.so.6 0x3e8ee
Build id: 7ea8d85df0e89b90c63ac7ed2b3578b2e7728756 		-
3
abort
/lib64/libc.so.6 0x2698f
Build id: 7ea8d85df0e89b90c63ac7ed2b3578b2e7728756 		-
4
std::chrono::_V2::system_clock::now()
/lib64/libstdc++.so.6 0xd95b0
Build id: 135b17851e2f57f305c48a54822dfd08cdaf060e 		-
5
sample_labels(arma::Col<unsigned int>&, std::vector<GaussVarKnown, std::allocator<GaussVarKnown> >&, std::unordered_map<unsigned int, unsigned int, std::hash<unsigned int>, std::equal_to<unsigned int>, std::allocator<std::pair<unsigned int const, unsigned int> > >&, std::unordered_map<unsigned int, unsigned int, std::hash<unsigned int>, std::equal_to<unsigned int>, std::allocator<std::pair<unsigned int const, unsigned int> > >&, std::vector<unsigned int, std::allocator<unsigned int> >&, unsigned int&, arma::Col<double> const&, arma::Col<double> const&, double const&, double const&, double const&)
/tmp/Rtmp0fG9LB/sourceCpp-x86_64-redhat-linux-gnu-1.1.2/sourcecpp_d8eff518b50/sourceCpp_10.so 0x10b7b
Build id: 8ab38e03847a2bb34a6afea32f4e8887f1d63d61 		-
6
DPMslice(arma::Col<double> const&, double const&, double const&, double const&, double const&, unsigned int const&, unsigned int const&, double const&, Rcpp::Nullable<Rcpp::Vector<14, Rcpp::PreserveStorage> > const&)
/tmp/Rtmp0fG9LB/sourceCpp-x86_64-redhat-linux-gnu-1.1.2/sourcecpp_d8eff518b50/sourceCpp_10.so 0x12470
Build id: 8ab38e03847a2bb34a6afea32f4e8887f1d63d61 		-
7
sourceCpp_1_DPMslice
/tmp/Rtmp0fG9LB/sourceCpp-x86_64-redhat-linux-gnu-1.1.2/sourcecpp_d8eff518b50/sourceCpp_10.so 0x139cd
Build id: 8ab38e03847a2bb34a6afea32f4e8887f1d63d61 		-
8
R_doDotCall
/usr/lib64/R/lib/libR.so 0xffe1e
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
9
do_dotcall
/usr/lib64/R/lib/libR.so 0x100540
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
10
Rf_eval
/usr/lib64/R/lib/libR.so 0x12ee0c
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
11
R_execClosure
/usr/lib64/R/lib/libR.so 0x12d223
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
12
Rf_applyClosure
/usr/lib64/R/lib/libR.so 0x12e330
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
13
Rf_eval
/usr/lib64/R/lib/libR.so 0x12e730
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
14
do_set
/usr/lib64/R/lib/libR.so 0x13472c
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
15
Rf_eval
/usr/lib64/R/lib/libR.so 0x12eac4
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
16
Rf_ReplIteration
/usr/lib64/R/lib/libR.so 0x18edd1
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
17
R_ReplConsole
/usr/lib64/R/lib/libR.so 0x18f191
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
18
run_Rmainloop
/usr/lib64/R/lib/libR.so 0x18f259
Build id: 79881c7287362b8bb769049f747c64fb829fa3a3 		-
19
rstudio::r::session::run(rstudio::r::session::ROptions const&, rstudio::r::session::RCallbacks const&)
/usr/libexec/rstudio/bin/rsession 0x88247b
Build id: 76b610b6f57e4ab2dc63ae62223fbd00594a7bd8 		-
20
main
/usr/libexec/rstudio/bin/rsession 0x1ba98e
Build id: 76b610b6f57e4ab2dc63ae62223fbd00594a7bd8 		-
21
__libc_start_call_main
/lib64/libc.so.6 0x2814a
Build id: 7ea8d85df0e89b90c63ac7ed2b3578b2e7728756 		-
22
__libc_start_main@@GLIBC_2.34
/lib64/libc.so.6 0x2820b
Build id: 7ea8d85df0e89b90c63ac7ed2b3578b2e7728756 		-
23
_start
/usr/libexec/rstudio/bin/rsession 0x1f5e65
Build id: 76b610b6f57e4ab2dc63ae62223fbd00594a7bd8 		-