Crash in __pthread_kill_implementation

Similar reports
Problem #498904
Component
dssp
Last affected version
0:3.0.0-16.fc37
Executable
/usr/bin/mkdssp
Error name
SIGABRT 6
First occurrence
2022-09-15
Last occurrence
2026-08-18
Unique reports
4
Quality
-18

Graphs

Statistics

Operating system Unique / Total count
Fedora 36 8 / 41
Fedora 37 9 / 21
Fedora 38 4 / 17
Operating system Count
Fedora 36 41
Fedora 37 21
Fedora 38 17
Architecture Count
x86_64 79
Related packages Count
dssp 79
 0:3.0.0-14.fc36 41
 0:3.0.0-16.fc37 38
boost-thread 38
 0:1.78.0-9.fc37 21
 0:1.78.0-11.fc38 14
 0:1.78.0-14.fc38 3
boost-program-options 38
 0:1.78.0-9.fc37 21
 0:1.78.0-11.fc38 14
 0:1.78.0-14.fc38 3
Show more… (3)
libgcc 6
 0:12.3.1-1.fc37 3
 0:13.2.1-4.fc38 3
glibc 6
 0:2.36-18.fc37 3
 0:2.37-13.fc38 3
libstdc++ 6
 0:12.3.1-1.fc37 3
 0:13.2.1-4.fc38 3

Packages names with count less than the total count of reports are most probably not the cause of the problem.

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Backtrace

Frame # Function Binary Source or offset Line
1
__pthread_kill_implementation
/lib64/libc.so.6 0x8ec4c
Build id: 6f5ce514a9e7f51e0247a527c3a41ed981c04458 		-
2
raise
/lib64/libc.so.6 0x3e9c6
Build id: 6f5ce514a9e7f51e0247a527c3a41ed981c04458 		-
3
abort
/lib64/libc.so.6 0x287f4
Build id: 6f5ce514a9e7f51e0247a527c3a41ed981c04458 		-
4
__gnu_debug::_Safe_sequence_base::_M_get_mutex()
/lib64/libstdc++.so.6 0xd7e40
Build id: 966126bdc5035b23b132a2a335b11a162f2f16fb 		-
5
MProtein::ReadPDB(std::istream&, bool) [clone .constprop.0]
/usr/bin/mkdssp 0x4247f
Build id: 3e49fc755713b97342b7e72364c1dab127c44eb2 		-
6
main
/usr/bin/mkdssp 0x16aaa
Build id: 3e49fc755713b97342b7e72364c1dab127c44eb2 		-
7
__libc_start_call_main
/lib64/libc.so.6 0x29550
Build id: 6f5ce514a9e7f51e0247a527c3a41ed981c04458 		-
8
__libc_start_main@@GLIBC_2.34
/lib64/libc.so.6 0x29609
Build id: 6f5ce514a9e7f51e0247a527c3a41ed981c04458 		-
9
_start
/usr/bin/mkdssp 0x18a75
Build id: 3e49fc755713b97342b7e72364c1dab127c44eb2 		-