Crash in __pthread_kill_implementation

Similar reports
Problem #643256
Component
avogadro2
Last affected version
0:1.99.0-4.fc41
Executable
/usr/bin/avogadro2
Error name
SIGABRT 6
First occurrence
2023-12-16
Last occurrence
2026-01-19
Unique reports
6
Quality
-66

Graphs

Statistics

Operating system Unique / Total count
Fedora 38 4 / 7
Fedora 39 23 / 42
Fedora 40 17 / 34
Fedora 41 6 / 8
Operating system Count
Fedora 39 42
Fedora 40 34
Fedora 41 8
Fedora 38 7
Architecture Count
x86_64 91
Related packages Count
avogadro2 74
 0:1.97.0-4.fc39 42
 0:1.99.0-1.fc40 17
 0:1.97.0-3.fc38 7
 0:1.99.0-4.fc41 7
 0:1.99.0-1.fc41 1
llvm-libs 13
 0:18.1.8-2.fc40 5
 0:17.0.6-2.fc39 4
 0:16.0.6-3.fc38 3
 0:18.1.6-2.fc40 1
google-noto-sans-mono-vf-fonts 11
 0:20230801-4.fc39 7
 0:20230201-2.fc38 4
Show more… (21)
abattis-cantarell-fonts 10
 0:0.301-13.fc41 5
 0:0.301-9.fc38 4
 0:0.301-10.fc39 1
xorg-x11-drv-nvidia-libs 8
 3:550.78-1.fc38 4
 3:545.29.06-1.fc39 2
 3:550.78-1.fc40 1
 3:545.29.06-2.fc39 1
bitstream-vera-sans-mono-fonts 5
 0:1.10-48.fc38 5
bitstream-vera-sans-fonts 5
 0:1.10-48.fc38 5
librsvg2 5
 0:2.59.2-1.fc41 5
libvorbis 5
 1:1.3.7-11.fc41 5
mesa-dri-drivers 5
 0:23.3.5-1.fc39 4
 0:24.0.6-2.fc40 1
libtdb 5
 0:1.4.12-3.fc41 5
libtool-ltdl 5
 0:2.4.7-12.fc41 5
hicolor-icon-theme 2
 0:0.17-16.fc39 2
qt5-qtwebengine 2
 0:5.15.16-6.fc40 1
 0:5.15.12-9.fc39 1
google-noto-sans-mono-fonts 2
 0:20230801-4.fc39 2
openexr-libs 2
 0:3.1.10-2.fc39 2
ibus-libs 1
 0:1.5.29~rc2-5.fc39 1
sssd-common 1
 0:2.9.6-1.fc40 1
sssd-client 1
 0:2.9.6-1.fc40 1
kf5-kwindowsystem 1
 0:5.111.0-1.fc39 1
julietaula-montserrat-fonts 1
 1:7.222-5.fc39 1
nvidia-driver-libs 1
 3:560.35.03-1.fc39 1
abattis-cantarell-vf-fonts 1
 0:0.301-10.fc39 1
glibc 1
 0:2.38-14.fc39 1

Packages names with count less than the total count of reports are most probably not the cause of the problem.

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Backtrace

Frame # Function Binary Source or offset Line
1
__pthread_kill_implementation
/lib64/libc.so.6 0x90834
Build id: 788cdd41a15985bf8e0a48d213a46e07d58822df 		-
2
raise
/lib64/libc.so.6 0x3e8ee
Build id: 788cdd41a15985bf8e0a48d213a46e07d58822df 		-
3
abort
/lib64/libc.so.6 0x268ff
Build id: 788cdd41a15985bf8e0a48d213a46e07d58822df 		-
4
std::chrono::_V2::system_clock::now()
/lib64/libstdc++.so.6 0xd9580
Build id: 43b5fe9c4fe0185772be4b57539be137c14a5c05 		-
5
Avogadro::Core::Graph::addEdge(unsigned long, unsigned long)
/lib64/libAvogadroCore.so.1 0x97a95
Build id: 432a5fb17aa743b6f35780e7810f9081bc9a8b56 		-
6
Avogadro::Core::Molecule::addBond(unsigned long, unsigned long, unsigned char)
/lib64/libAvogadroCore.so.1 0xa98af
Build id: 432a5fb17aa743b6f35780e7810f9081bc9a8b56 		-
7
QUndoStack::push(QUndoCommand*)
/lib64/libQt5Widgets.so.5 0x575e89
Build id: fdd09cb12cb5a5bb82aa9f1b6a6645a3055bc64f 		-
8
Avogadro::QtGui::RWMolecule::addBond(unsigned long, unsigned long, unsigned char)
/lib64/libAvogadroQtGui.so.1 0x7259e
Build id: 32e674e98b4b6daf20b6479f42a65e94191c198c 		-
9
Avogadro::QtPlugins::Editor::atomLeftDrag(QMouseEvent*)
/lib64/libAvogadroQtPlugins.so.1 0xb5977
Build id: 3227214e6d55926eb2a203b6ff5d9c23a0ee9c51 		-
10
Avogadro::QtPlugins::Editor::mouseMoveEvent(QMouseEvent*)
/lib64/libAvogadroQtPlugins.so.1 0xb5a60
Build id: 3227214e6d55926eb2a203b6ff5d9c23a0ee9c51 		-
11
Avogadro::QtOpenGL::GLWidget::mouseMoveEvent(QMouseEvent*)
/lib64/libAvogadroQtOpenGL.so.1 0x9d97
Build id: bb8749bb4f633b7f885ccc4259f9cc7f0f745fc2 		-
12
QWidget::event(QEvent*)
/lib64/libQt5Widgets.so.5 0x1f3698
Build id: fdd09cb12cb5a5bb82aa9f1b6a6645a3055bc64f 		-
13
QApplicationPrivate::notify_helper(QObject*, QEvent*)
/lib64/libQt5Widgets.so.5 0x1aeb75
Build id: fdd09cb12cb5a5bb82aa9f1b6a6645a3055bc64f 		-
14
QApplication::notify(QObject*, QEvent*)
/lib64/libQt5Widgets.so.5 0x1b7456
Build id: fdd09cb12cb5a5bb82aa9f1b6a6645a3055bc64f 		-
15
QCoreApplication::notifyInternal2(QObject*, QEvent*)
/lib64/libQt5Core.so.5 0x2b4598
Build id: 38cfc9ef6417fa5689314e7deaf3ca256c7d87d0 		-
16
QApplicationPrivate::sendMouseEvent(QWidget*, QMouseEvent*, QWidget*, QWidget*, QWidget**, QPointer<QWidget>&, bool, bool)
/lib64/libQt5Widgets.so.5 0x1b56a4
Build id: fdd09cb12cb5a5bb82aa9f1b6a6645a3055bc64f 		-
17
QWidgetWindow::handleMouseEvent(QMouseEvent*)
/lib64/libQt5Widgets.so.5 0x20d1b9
Build id: fdd09cb12cb5a5bb82aa9f1b6a6645a3055bc64f 		-
18
QWidgetWindow::event(QEvent*)
/lib64/libQt5Widgets.so.5 0x21073f
Build id: fdd09cb12cb5a5bb82aa9f1b6a6645a3055bc64f 		-
19
QApplicationPrivate::notify_helper(QObject*, QEvent*)
/lib64/libQt5Widgets.so.5 0x1aeb75
Build id: fdd09cb12cb5a5bb82aa9f1b6a6645a3055bc64f 		-
20
QCoreApplication::notifyInternal2(QObject*, QEvent*)
/lib64/libQt5Core.so.5 0x2b4598
Build id: 38cfc9ef6417fa5689314e7deaf3ca256c7d87d0 		-
21
QGuiApplicationPrivate::processMouseEvent(QWindowSystemInterfacePrivate::MouseEvent*)
/lib64/libQt5Gui.so.5 0x16cc1b
Build id: 7a36dbefc27a6410dcce2a6d200b8ce705a7fb36 		-
22
QWindowSystemInterface::sendWindowSystemEvents(QFlags<QEventLoop::ProcessEventsFlag>)
/lib64/libQt5Gui.so.5 0x14acfc
Build id: 7a36dbefc27a6410dcce2a6d200b8ce705a7fb36 		-
23
xcbSourceDispatch(_GSource*, int (*)(void*), void*)
/lib64/libQt5XcbQpa.so.5 0x714d6
Build id: 65af5b25cd0efb07a4c15f648b8bafc5db2647a3 		-
24
g_main_context_dispatch_unlocked.lto_priv.0
/lib64/libglib-2.0.so.0 0x5be5c
Build id: b6cf99186f67796c572114f06c6ee38c300c212b 		-
25
g_main_context_iterate_unlocked.isra.0
/lib64/libglib-2.0.so.0 0xb6f18
Build id: b6cf99186f67796c572114f06c6ee38c300c212b 		-
26
g_main_context_iteration
/lib64/libglib-2.0.so.0 0x59ad3
Build id: b6cf99186f67796c572114f06c6ee38c300c212b 		-
27
QEventDispatcherGlib::processEvents(QFlags<QEventLoop::ProcessEventsFlag>)
/lib64/libQt5Core.so.5 0x306ad9
Build id: 38cfc9ef6417fa5689314e7deaf3ca256c7d87d0 		-
28
QEventLoop::exec(QFlags<QEventLoop::ProcessEventsFlag>)
/lib64/libQt5Core.so.5 0x2b2f5b
Build id: 38cfc9ef6417fa5689314e7deaf3ca256c7d87d0 		-
29
QCoreApplication::exec()
/lib64/libQt5Core.so.5 0x2bb1eb
Build id: 38cfc9ef6417fa5689314e7deaf3ca256c7d87d0 		-
30
main
/usr/bin/avogadro2 0x18206
Build id: 61d223daafc3bc48e53c22677cf0bca60c388a89 		-
31
__libc_start_call_main
/lib64/libc.so.6 0x2814a
Build id: 788cdd41a15985bf8e0a48d213a46e07d58822df 		-
32
__libc_start_main@@GLIBC_2.34
/lib64/libc.so.6 0x2820b
Build id: 788cdd41a15985bf8e0a48d213a46e07d58822df 		-
33
_start
/usr/bin/avogadro2 0x19055
Build id: 61d223daafc3bc48e53c22677cf0bca60c388a89 		-